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  • BEAST Software - Bayesian Evolutionary Analysis Sampling Trees | BEAST . . .
    What is BEAST? BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models
  • FigTree | BEAST Documentation
    FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures
  • First Tutorial | BEAST Documentation
    Running BEAST for the first time This tutorial will guide you through running BEAST and some of its accessory programs to do a simple phylogenetic analysis If you haven’t already, download and install BEAST following these instructions
  • Downloading and installing BEAST on Windows | BEAST Documentation
    Downloading and installing BEAST on Windows BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees
  • BEAGLE | BEAST Documentation
    Using BEAGLE with BEAST BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics package It can make use of highly-parallel processors such as those in graphics processing units (GPUs) found in many PCs The current version of BEAGLE will only work with BEAST v1 6 or later Downloading and installing BEAGLE
  • BEAUti The BEAST and other programs
    BEAST | Bayesian Evolutionary Analysis Sampling Trees This is the main program that takes a control file generated by BEAUti and performs the analysis
  • Installing BEAST | BEAST Documentation
    Installing BEAST BEAST has been developed in Java, which allows the same code to run on any platform that has the Java software installed We have also created packages for each of the common operating systems to provide a user-interface that is ‘native’ and familiar Latest Version
  • Downloading and installing BEAST on UNIX Linux
    Downloading and installing BEAST on UNIX Linux BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees
  • Frequently Asked Questions | BEAST Documentation
    BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology BEAST uses MCMC
  • TreeAnnotator | BEAST Documentation
    TreeAnnotator is a program to summarize the information from a sample of trees produced by BEAST onto a single “target” tree The summary information includes the posterior probabilities of the nodes in the target tree, the posterior estimates and HPD limits of the node heights and (in the case of a relaxed molecular clock model) the rates





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